PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0002s0032.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family Trihelix
Protein Properties Length: 210aa    MW: 23911.4 Da    PI: 6.1314
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0002s0032.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix30.97.1e-10109193286
             trihelix   2 WtkqevlaLiearremeerlrrgk....lkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                          W  +e+  Li +r++ +  +++g     ++++lW+ v+ ++ +e++ ++  kqC+  w+ l k+y  + +g+k+r     + +p+f++++
  Mapoly0002s0032.1.p 109 WDASEIEYLILMRTSADGLFKQGVkdkfSIMKLWDFVAGQLpSEGQARKDGKQCQWMWNMLMKEYTDVLTGAKER-----KDFPHFEEMD 193
                          99*******************8743445899**********55666677************************96.....5699****98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512575126No hitNo description
PfamPF138376.3E-9108194No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MGSVLHRIRE KKLAHVLSLM MASTACGDVS PGTERRKQKC NIDDQEQVPD STVVVTDIAL  60
HYQRQCFVTS APESVGVISV YDTIFLKTFK IVNEQGATLV SRVLERTFWD ASEIEYLILM  120
RTSADGLFKQ GVKDKFSIMK LWDFVAGQLP SEGQARKDGK QCQWMWNMLM KEYTDVLTGA  180
KERKDFPHFE EMDQAWECTC GKRLEDINN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63420.11e-08Trihelix family protein